The 2.0 version of rSNPBase

Variant report

Variant rs6793670
Chromosome Location chr3:179459299-179459300
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179399000-179459800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr3:179420200-179478800 Weak transcription Rectal Smooth Muscle rectum
4 chr3:179422800-179460600 Weak transcription Duodenum Mucosa Duodenum
5 chr3:179424000-179474800 Weak transcription Fetal Kidney kidney
6 chr3:179424400-179487600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr3:179428800-179460000 Weak transcription Brain Substantia Nigra brain
8 chr3:179429000-179466200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:179435600-179460000 Weak transcription NHDF-Ad bronchial
10 chr3:179436000-179459800 Weak transcription Small Intestine intestine
11 chr3:179437400-179490200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr3:179438400-179489200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr3:179441000-179484200 Weak transcription Colon Smooth Muscle Colon
15 chr3:179441200-179460600 Weak transcription Brain Cingulate Gyrus brain
16 chr3:179441400-179459800 Weak transcription Hela-S3 cervix
17 chr3:179444200-179460000 Weak transcription Pancreas Pancrea
18 chr3:179444600-179460000 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr3:179444600-179461800 Weak transcription Primary monocytes fromperipheralblood blood
20 chr3:179444800-179462600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr3:179446800-179465600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr3:179446800-179466400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr3:179447000-179465600 Strong transcription Fetal Muscle Trunk muscle
24 chr3:179448800-179459600 Weak transcription HSMM muscle
25 chr3:179448800-179460000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr3:179449000-179460000 Weak transcription Fetal Thymus thymus
27 chr3:179449400-179460000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr3:179449400-179503400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr3:179449600-179460000 Weak transcription Brain Anterior Caudate brain
30 chr3:179449600-179460200 Weak transcription NH-A brain
31 chr3:179449800-179460200 Weak transcription Gastric stomach
32 chr3:179450000-179460000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr3:179450000-179460000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr3:179450000-179478400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr3:179450000-179484200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr3:179450000-179487200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr3:179450200-179462400 Weak transcription Spleen Spleen
38 chr3:179450400-179459400 Weak transcription GM12878-XiMat blood
39 chr3:179450400-179459800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr3:179450400-179460000 Weak transcription H9 Cell Line embryonic stem cell
41 chr3:179450400-179460000 Weak transcription Primary B cells from peripheral blood blood
42 chr3:179450400-179474000 Weak transcription Placenta Placenta
43 chr3:179450400-179483200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr3:179450400-179491800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr3:179450600-179459400 Weak transcription Primary hematopoietic stem cells blood
46 chr3:179450800-179460000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr3:179451000-179460000 Weak transcription Brain Hippocampus Middle brain
48 chr3:179451000-179460000 Weak transcription Fetal Intestine Large intestine
49 chr3:179451000-179460000 Weak transcription NHLF lung
50 chr3:179451200-179462000 Weak transcription Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015