The 2.0 version of rSNPBase

Variant report

Variant rs6795209
Chromosome Location chr3:88210464-88210465
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88199800-88216800 Weak transcription Esophagus oesophagus
2 chr3:88200800-88214600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr3:88200800-88218000 Weak transcription Pancreas Pancrea
4 chr3:88200800-88221600 Weak transcription Psoas Muscle Psoas
5 chr3:88200800-88224400 Weak transcription Aorta Aorta
6 chr3:88201400-88212200 Weak transcription Colonic Mucosa Colon
7 chr3:88202000-88211400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:88202200-88211000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr3:88202200-88211800 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr3:88202200-88212000 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr3:88202600-88211000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:88202600-88211200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:88202800-88212600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr3:88203000-88212200 Strong transcription Primary monocytes fromperipheralblood blood
15 chr3:88203000-88214200 Weak transcription Small Intestine intestine
16 chr3:88204200-88212400 Strong transcription Primary B cells from peripheral blood blood
17 chr3:88204400-88217400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr3:88205000-88213800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:88205600-88212400 Weak transcription Gastric stomach
20 chr3:88205600-88217600 Weak transcription Fetal Intestine Small intestine
21 chr3:88205600-88222000 Weak transcription Fetal Stomach stomach
22 chr3:88205600-88222800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr3:88205800-88217800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr3:88205800-88220200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr3:88205800-88227000 Weak transcription Lung lung
26 chr3:88205800-88232400 Weak transcription Left Ventricle heart
27 chr3:88206000-88213000 Weak transcription Spleen Spleen
28 chr3:88206000-88214600 Weak transcription Brain Hippocampus Middle brain
29 chr3:88206000-88217800 Weak transcription Fetal Muscle Leg muscle
30 chr3:88206000-88226800 Weak transcription Ovary ovary
31 chr3:88206000-88229800 Weak transcription Thymus Thymus
32 chr3:88206200-88211600 Weak transcription Placenta Amnion Placenta Amnion
33 chr3:88206200-88213800 Weak transcription HUVEC blood vessel
34 chr3:88206200-88214000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr3:88206200-88221200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr3:88206200-88221800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr3:88206600-88213600 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr3:88206600-88214400 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr3:88206600-88214400 Weak transcription Fetal Brain Female brain
40 chr3:88206600-88214600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr3:88206600-88217400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr3:88206800-88211400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr3:88206800-88213400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr3:88206800-88214000 Weak transcription HSMMtube muscle
45 chr3:88206800-88223400 Weak transcription Fetal Muscle Trunk muscle
46 chr3:88207000-88211200 Weak transcription Fetal Heart heart
47 chr3:88207000-88212400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr3:88207000-88212800 Weak transcription NH-A brain
49 chr3:88207200-88212400 Weak transcription Fetal Kidney kidney
50 chr3:88207200-88213800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015