Variant report

Variant	rs67980272
Chromosome Location	chr8:120398843-120398844
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11782995	0.98[ASN][1000 genomes]
rs16892491	0.94[ASN][1000 genomes]
rs16892497	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1870779	0.82[ASN][1000 genomes]
rs2071526	0.92[ASN][1000 genomes]
rs2279112	0.84[ASN][1000 genomes]
rs55976504	0.96[ASN][1000 genomes]
rs56768061	0.94[ASN][1000 genomes]
rs57103042	0.94[ASN][1000 genomes]
rs60484498	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs67665719	0.88[ASN][1000 genomes]
rs7014927	0.83[ASN][1000 genomes]
rs72684286	0.94[ASN][1000 genomes]
rs72684287	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72684288	1.00[ASN][1000 genomes]
rs72684289	0.96[ASN][1000 genomes]
rs72684293	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs72684294	0.90[AMR][1000 genomes]
rs7839760	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1026655	chr8:120282929-120522329	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
3	nsv534028	chr8:120348940-120906079	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	esv3378587	chr8:120387820-120408400	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120398800-120399000	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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