The 2.0 version of rSNPBase

Variant report

Variant rs6828934
Chromosome Location chr4:174104835-174104836
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174091600-174113600 Weak transcription Esophagus oesophagus
2 chr4:174092800-174106000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr4:174092800-174109000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr4:174093600-174109800 Weak transcription Gastric stomach
5 chr4:174093800-174105000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:174095000-174109400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr4:174096200-174111200 Weak transcription Small Intestine intestine
8 chr4:174098000-174106400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr4:174098600-174106200 Weak transcription Fetal Thymus thymus
10 chr4:174098800-174108400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr4:174099000-174106200 Weak transcription Dnd41 blood
12 chr4:174099000-174109400 Weak transcription H9 Cell Line embryonic stem cell
13 chr4:174099200-174111200 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr4:174099800-174106000 Weak transcription K562 blood
15 chr4:174100000-174112200 Weak transcription Brain Substantia Nigra brain
16 chr4:174101000-174106600 Weak transcription Primary B cells from cord blood blood
17 chr4:174101200-174106000 Weak transcription Duodenum Mucosa Duodenum
18 chr4:174102000-174106400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr4:174102600-174106600 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr4:174103200-174105400 Weak transcription Fetal Intestine Small intestine
21 chr4:174103200-174106200 Weak transcription Primary T cells from cord blood blood
22 chr4:174103200-174106400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr4:174103200-174106600 Weak transcription Brain Hippocampus Middle brain
24 chr4:174103400-174106400 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr4:174103400-174106800 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr4:174103600-174109400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr4:174103800-174105200 Strong transcription Thymus Thymus
28 chr4:174103800-174106200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:174103800-174106400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr4:174104000-174105400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr4:174104000-174106000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr4:174104000-174106000 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr4:174104000-174106200 Weak transcription Primary hematopoietic stem cells blood
34 chr4:174104000-174108000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr4:174104000-174109400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr4:174104000-174109400 Weak transcription Pancreas Pancrea
37 chr4:174104000-174109400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr4:174104000-174112400 Weak transcription Aorta Aorta
39 chr4:174104000-174112400 Weak transcription Brain Anterior Caudate brain
40 chr4:174104000-174112600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr4:174104000-174157200 Weak transcription Ovary ovary
42 chr4:174104200-174106200 Weak transcription HUVEC blood vessel
43 chr4:174104200-174106400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr4:174104200-174108800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr4:174104200-174112200 Weak transcription Hela-S3 cervix
46 chr4:174104400-174105800 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr4:174104400-174106800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr4:174104400-174107000 Weak transcription Muscle Satellite Cultured Cells --
49 chr4:174104400-174108600 Weak transcription Osteobl bone
50 chr4:174104600-174105000 Weak transcription GM12878-XiMat blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015