The 2.0 version of rSNPBase

Variant report

Variant rs28581661
Chromosome Location chr4:174181916-174181917
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174159200-174204600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:174159600-174189000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:174163800-174184600 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr4:174164000-174185600 Weak transcription Primary T cells fromperipheralblood blood
5 chr4:174164000-174185800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr4:174164000-174186000 Weak transcription Aorta Aorta
7 chr4:174164200-174185400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr4:174165600-174182200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr4:174168600-174185800 Weak transcription Brain Germinal Matrix brain
10 chr4:174169400-174185400 Weak transcription Fetal Intestine Large intestine
11 chr4:174169600-174185600 Weak transcription Fetal Stomach stomach
12 chr4:174171400-174202600 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr4:174172000-174183400 Weak transcription Primary T cells from cord blood blood
14 chr4:174172200-174185400 Weak transcription Fetal Intestine Small intestine
15 chr4:174173600-174185400 Weak transcription Brain Angular Gyrus brain
16 chr4:174173600-174185600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr4:174173600-174186000 Weak transcription Esophagus oesophagus
18 chr4:174173600-174190400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr4:174173600-174202200 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr4:174173800-174184800 Weak transcription Duodenum Mucosa Duodenum
21 chr4:174173800-174185400 Weak transcription Brain Anterior Caudate brain
22 chr4:174174200-174185400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:174174200-174185600 Weak transcription Fetal Muscle Leg muscle
24 chr4:174174400-174185400 Weak transcription HSMMtube muscle
25 chr4:174174600-174182200 Weak transcription Stomach Mucosa stomach
26 chr4:174174600-174185400 Weak transcription HUVEC blood vessel
27 chr4:174174600-174195800 Weak transcription Primary monocytes fromperipheralblood blood
28 chr4:174175000-174185000 Weak transcription HSMM muscle
29 chr4:174176200-174182800 Genic enhancers Fetal Thymus thymus
30 chr4:174176600-174184600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr4:174177200-174184800 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:174177600-174197800 Weak transcription H9 Cell Line embryonic stem cell
33 chr4:174178400-174182200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr4:174178800-174185200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr4:174179000-174185400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr4:174179000-174186000 Weak transcription Placenta Amnion Placenta Amnion
37 chr4:174179000-174191600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr4:174179400-174185400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr4:174179600-174183600 Weak transcription A549 lung
40 chr4:174179600-174184400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr4:174179600-174185400 Weak transcription H1 Cell Line embryonic stem cell
42 chr4:174179600-174186000 Weak transcription Right Atrium heart
43 chr4:174179800-174182200 Weak transcription Thymus Thymus
44 chr4:174179800-174183600 Weak transcription Primary B cells from cord blood blood
45 chr4:174179800-174184200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr4:174179800-174184200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr4:174180000-174184600 Weak transcription GM12878-XiMat blood
48 chr4:174180400-174183600 Weak transcription Primary hematopoietic stem cells blood
49 chr4:174180400-174185400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr4:174180400-174186000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015