The 2.0 version of rSNPBase

Variant report

Variant rs72999548
Chromosome Location chr4:174187433-174187434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174159200-174204600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:174159600-174189000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:174171400-174202600 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr4:174173600-174190400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr4:174173600-174202200 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr4:174174600-174195800 Weak transcription Primary monocytes fromperipheralblood blood
7 chr4:174177600-174197800 Weak transcription H9 Cell Line embryonic stem cell
8 chr4:174179000-174191600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:174185600-174187600 Enhancers Fetal Stomach stomach
10 chr4:174186200-174188200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:174186200-174188600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr4:174186200-174190000 Weak transcription Fetal Heart heart
13 chr4:174186200-174190600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr4:174186200-174190800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr4:174186200-174191000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr4:174186200-174191400 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr4:174186200-174191600 Weak transcription Rectal Smooth Muscle rectum
18 chr4:174186200-174194200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr4:174186200-174196000 Weak transcription GM12878-XiMat blood
20 chr4:174186400-174188000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr4:174186400-174188400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr4:174186400-174188400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr4:174186400-174188400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr4:174186400-174188400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr4:174186400-174188600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr4:174186400-174190400 Weak transcription Brain Anterior Caudate brain
27 chr4:174186400-174191200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr4:174186400-174191400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr4:174186400-174191600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr4:174186400-174191800 Weak transcription Fetal Intestine Small intestine
31 chr4:174186400-174191800 Weak transcription Left Ventricle heart
32 chr4:174186400-174192000 Weak transcription Primary T cells fromperipheralblood blood
33 chr4:174186400-174192800 Enhancers Fetal Thymus thymus
34 chr4:174186400-174193400 Weak transcription Primary B cells from cord blood blood
35 chr4:174186400-174194800 Weak transcription H1 Cell Line embryonic stem cell
36 chr4:174186400-174196000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr4:174186400-174196000 Weak transcription Aorta Aorta
38 chr4:174186400-174196000 Weak transcription Fetal Intestine Large intestine
39 chr4:174186400-174196000 Weak transcription Gastric stomach
40 chr4:174186400-174196000 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr4:174186400-174198600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr4:174186400-174208600 Weak transcription Esophagus oesophagus
43 chr4:174186600-174188000 Enhancers Dnd41 blood
44 chr4:174186600-174188600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr4:174186600-174188800 Weak transcription Primary T cells from cord blood blood
46 chr4:174186600-174189000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr4:174186600-174190600 Weak transcription Brain Germinal Matrix brain
48 chr4:174186600-174190600 Weak transcription Fetal Lung lung
49 chr4:174186600-174191200 Weak transcription NHLF lung
50 chr4:174186600-174191400 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015