Variant report

Variant	rs683117
Chromosome Location	chr10:117143751-117143752
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10787567	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10787573	0.80[ASN][1000 genomes]
rs11197173	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11498596	0.83[EUR][1000 genomes]
rs12253499	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1494174	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1565833	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2201363	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2485966	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2485968	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2485971	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs594160	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs615905	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs671943	0.82[ASN][1000 genomes]
rs675816	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs679986	0.80[ASN][1000 genomes]
rs703352	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs9630104	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9630105	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117138200-117150800	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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