The 2.0 version of rSNPBase

Variant report

Variant rs6854881
Chromosome Location chr4:54633422-54633423
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54629200-54634400 Enhancers Muscle Satellite Cultured Cells --
2 chr4:54629400-54633800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr4:54630800-54634000 Enhancers NHLF lung
4 chr4:54630800-54635000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr4:54630800-54635800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr4:54631000-54635800 Enhancers Osteobl bone
7 chr4:54631600-54636200 Weak transcription Colon Smooth Muscle Colon
8 chr4:54631800-54633600 Weak transcription Ovary ovary
9 chr4:54631800-54633800 Weak transcription NH-A brain
10 chr4:54631800-54635800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr4:54631800-54635800 Enhancers NHDF-Ad bronchial
12 chr4:54631800-54637200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr4:54632000-54634600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr4:54632000-54635000 Weak transcription Fetal Stomach stomach
15 chr4:54632400-54634000 Enhancers HMEC breast
16 chr4:54632800-54633600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:54632800-54633800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:54633000-54636000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:54633400-54633800 Enhancers HSMMtube muscle
20 chr4:54633400-54634000 Enhancers HSMM muscle
21 chr4:54633400-54643200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015