Variant report

Variant	rs6874512
Chromosome Location	chr5:94310318-94310319
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10043438	0.88[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10452513	0.89[CHB][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rs12187469	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs12188624	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs13160334	0.96[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13160349	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13170123	0.89[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs13180001	0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs13184310	0.81[EUR][1000 genomes]
rs1437120	0.96[ASN][1000 genomes]
rs1437123	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17422580	0.86[JPT][hapmap];0.96[ASN][1000 genomes]
rs1816583	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2347475	0.97[ASN][1000 genomes]
rs2347476	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35060882	0.96[ASN][1000 genomes]
rs35067093	0.96[ASN][1000 genomes]
rs6556855	0.96[ASN][1000 genomes]
rs66888822	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6859308	0.96[ASN][1000 genomes]
rs6890714	0.89[CHB][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs6892227	0.89[CHB][hapmap];0.85[ASN][1000 genomes]
rs6892311	0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6892740	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6894879	0.89[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7702101	0.88[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7703557	0.88[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7724110	0.97[ASN][1000 genomes]
rs7731964	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9885361	0.89[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94301200-94311000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:94301200-94337600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:94301600-94310800	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:94301800-94310800	Weak transcription	Primary hematopoietic stem cells	blood
5	chr5:94304600-94310800	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr5:94305000-94310800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr5:94305400-94310800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr5:94305400-94310800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr5:94305400-94310800	Weak transcription	Brain Anterior Caudate	brain
10	chr5:94305400-94316000	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr5:94306000-94317200	Weak transcription	HUVEC	blood vessel
12	chr5:94308800-94310800	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr5:94309200-94312600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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