The 2.0 version of rSNPBase

Variant report

Variant rs6879970
Chromosome Location chr5:127387178-127387179
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127332400-127388800 Weak transcription Aorta Aorta
2 chr5:127333600-127388800 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr5:127333600-127417800 Weak transcription Pancreas Pancrea
4 chr5:127334600-127394000 Weak transcription Lung lung
5 chr5:127335000-127397600 Weak transcription NHDF-Ad bronchial
6 chr5:127353200-127397000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr5:127354000-127397400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr5:127354400-127398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr5:127354600-127409800 Weak transcription Left Ventricle heart
10 chr5:127356200-127399200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr5:127356400-127414000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr5:127357200-127393800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr5:127358800-127389000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr5:127360400-127393800 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr5:127366000-127389000 Weak transcription HSMMtube muscle
16 chr5:127369400-127398000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr5:127371600-127389000 Weak transcription Psoas Muscle Psoas
18 chr5:127371600-127398000 Weak transcription Small Intestine intestine
19 chr5:127373000-127388800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:127373000-127389000 Weak transcription Brain Angular Gyrus brain
21 chr5:127374600-127418000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr5:127375200-127389000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:127375200-127414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr5:127375800-127388600 Weak transcription Muscle Satellite Cultured Cells --
25 chr5:127375800-127391000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr5:127376000-127397000 Weak transcription NHEK skin
27 chr5:127376400-127397400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:127376400-127414400 Weak transcription Dnd41 blood
29 chr5:127377000-127391000 Weak transcription Fetal Muscle Leg muscle
30 chr5:127377200-127414200 Weak transcription K562 blood
31 chr5:127378000-127416600 Weak transcription Spleen Spleen
32 chr5:127378400-127401600 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr5:127378400-127414200 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr5:127378800-127415800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr5:127379000-127417400 Weak transcription Fetal Muscle Trunk muscle
36 chr5:127380000-127390200 Weak transcription Right Ventricle heart
37 chr5:127380000-127390800 Weak transcription Duodenum Mucosa Duodenum
38 chr5:127380200-127387200 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr5:127380200-127398000 Weak transcription Esophagus oesophagus
40 chr5:127380200-127414600 Weak transcription Primary hematopoietic stem cells blood
41 chr5:127380200-127416200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr5:127380400-127402800 Weak transcription Gastric stomach
43 chr5:127381000-127393800 Weak transcription Ovary ovary
44 chr5:127384600-127389000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:127384600-127397600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr5:127384800-127397800 Weak transcription Brain Hippocampus Middle brain
47 chr5:127385000-127387800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:127385400-127388800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr5:127385400-127398000 Weak transcription Brain Cingulate Gyrus brain
50 chr5:127385600-127387800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015