Variant report

Variant rs6894846
Chromosome Location chr5:179991959-179991960
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179950200-179992000 Weak transcription Right Ventricle heart
2 chr5:179950400-179992400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:179950600-180004000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr5:179960000-180000600 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr5:179960200-179998200 Weak transcription Spleen Spleen
6 chr5:179961200-179992600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr5:179964000-179992600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:179970000-179992200 Weak transcription HSMM muscle
9 chr5:179970800-180006600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:179971600-179992000 Weak transcription HUVEC blood vessel
11 chr5:179973800-180005200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr5:179974400-180005800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:179975000-180005800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr5:179975600-179992000 Weak transcription Psoas Muscle Psoas
15 chr5:179975600-180004600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr5:179976200-179998200 Weak transcription Fetal Heart heart
17 chr5:179976200-180007200 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr5:179978000-179992000 Weak transcription Colonic Mucosa Colon
19 chr5:179978000-179992400 Weak transcription NHEK skin
20 chr5:179978400-179992400 Weak transcription H9 Cell Line embryonic stem cell
21 chr5:179978400-179998400 Weak transcription Aorta Aorta
22 chr5:179981400-179992000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr5:179981400-179992600 Weak transcription Lung lung
24 chr5:179981600-179992000 Weak transcription Left Ventricle heart
25 chr5:179983200-179992400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr5:179983400-179992200 Weak transcription Osteobl bone
27 chr5:179983600-179993000 Weak transcription Placenta Amnion Placenta Amnion
28 chr5:179983800-179992000 Weak transcription NHLF lung
29 chr5:179985000-180005600 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr5:179985400-180005800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr5:179987200-180005800 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr5:179987400-180006000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr5:179987600-180001400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr5:179987600-180005600 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr5:179987800-180005200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:179988000-180005600 Strong transcription Primary monocytes fromperipheralblood blood
37 chr5:179988400-179995200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr5:179988400-179998600 Strong transcription Primary hematopoietic stem cells blood
39 chr5:179988400-180005400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:179988400-180005800 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr5:179988400-180005800 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr5:179988400-180005800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr5:179988600-180004600 Strong transcription H1 Cell Line embryonic stem cell
44 chr5:179988600-180005200 Strong transcription Primary B cells from peripheral blood blood
45 chr5:179988800-180005400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr5:179988800-180005800 Strong transcription iPS-18 Cell Line embryonic stem cell
47 chr5:179989000-179997000 Weak transcription Pancreas Pancrea
48 chr5:179989000-180002400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr5:179989200-179992000 Weak transcription Fetal Stomach stomach
50 chr5:179989200-179992000 Weak transcription Sigmoid Colon Sigmoid Colon

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