Variant report

Variant rs1105972
Chromosome Location chr5:179924384-179924385
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179922600-179924600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr5:179922600-179925200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:179922600-179925400 Weak transcription Colonic Mucosa Colon
4 chr5:179922800-179925400 Weak transcription Aorta Aorta
5 chr5:179923000-179934600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr5:179923200-179924600 Genic enhancers Fetal Lung lung
7 chr5:179923200-179924800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:179923200-179925400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:179923200-179925800 Weak transcription Esophagus oesophagus
10 chr5:179923200-179926200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr5:179923200-179926400 Weak transcription Stomach Mucosa stomach
12 chr5:179923200-179926600 Weak transcription HSMMtube muscle
13 chr5:179923200-179928400 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr5:179923200-179936400 Weak transcription Fetal Intestine Large intestine
15 chr5:179923400-179924600 Enhancers Brain Cingulate Gyrus brain
16 chr5:179923400-179926800 Weak transcription Small Intestine intestine
17 chr5:179923400-179927200 Genic enhancers K562 blood
18 chr5:179923400-179946000 Weak transcription Primary B cells from peripheral blood blood
19 chr5:179923600-179924400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr5:179923600-179924400 Enhancers Primary T helper cells PMA-I stimulated --
21 chr5:179923600-179924400 Strong transcription Fetal Intestine Small intestine
22 chr5:179923600-179924400 Enhancers Lung lung
23 chr5:179923600-179924400 Genic enhancers Thymus Thymus
24 chr5:179923600-179924400 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr5:179923600-179924600 Genic enhancers HUES48 Cell Line embryonic stem cell
26 chr5:179923600-179924600 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr5:179923600-179924600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:179923600-179924600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr5:179923600-179924600 Enhancers Fetal Brain Male brain
30 chr5:179923600-179924600 Strong transcription HSMM muscle
31 chr5:179923600-179924800 Weak transcription NH-A brain
32 chr5:179923600-179925000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr5:179923600-179925200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:179923600-179925200 Weak transcription Primary hematopoietic stem cells blood
35 chr5:179923600-179925200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr5:179923600-179925400 Weak transcription Brain Anterior Caudate brain
37 chr5:179923600-179925400 Weak transcription Ovary ovary
38 chr5:179923600-179925600 Enhancers HepG2 liver
39 chr5:179923600-179925800 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr5:179923600-179926400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:179923600-179926600 Weak transcription Primary B cells from cord blood blood
42 chr5:179923600-179926600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:179923600-179926600 Weak transcription Adipose Nuclei Adipose
44 chr5:179923600-179927400 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr5:179923600-179927600 Weak transcription Stomach Smooth Muscle stomach
46 chr5:179923600-179928000 Genic enhancers Dnd41 blood
47 chr5:179923600-179928600 Weak transcription HUVEC blood vessel
48 chr5:179923600-179929600 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr5:179923600-179930400 Weak transcription NHLF lung
50 chr5:179923600-179931200 Weak transcription Primary monocytes fromperipheralblood blood

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