Variant report

Variant rs11949971
Chromosome Location chr5:179948748-179948749
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179923600-179949800 Weak transcription Gastric stomach
2 chr5:179923600-179949800 Weak transcription Psoas Muscle Psoas
3 chr5:179923600-179957000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr5:179924000-179949800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr5:179924200-179949200 Weak transcription Pancreas Pancrea
6 chr5:179924200-179949600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr5:179924200-179950000 Weak transcription Brain Angular Gyrus brain
8 chr5:179924600-179949800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:179924600-179957000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr5:179925800-179949200 Weak transcription Left Ventricle heart
11 chr5:179927000-179954400 Weak transcription Hela-S3 cervix
12 chr5:179927400-179949200 Weak transcription H1 Cell Line embryonic stem cell
13 chr5:179927400-179949200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr5:179927400-179949600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:179929000-179959200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr5:179933800-179950000 Weak transcription Colon Smooth Muscle Colon
17 chr5:179933800-179959000 Weak transcription Placenta Amnion Placenta Amnion
18 chr5:179934200-179949600 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr5:179934200-179956600 Weak transcription Rectal Smooth Muscle rectum
20 chr5:179935000-179951000 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr5:179935200-179951400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr5:179936800-179949200 Weak transcription Thymus Thymus
23 chr5:179936800-179949600 Weak transcription Fetal Muscle Leg muscle
24 chr5:179936800-179950000 Weak transcription Fetal Stomach stomach
25 chr5:179936800-179956200 Weak transcription Fetal Muscle Trunk muscle
26 chr5:179938800-179956600 Weak transcription HSMM muscle
27 chr5:179942000-179951800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr5:179942000-179956400 Weak transcription Brain Germinal Matrix brain
29 chr5:179942000-179958800 Weak transcription Esophagus oesophagus
30 chr5:179942200-179949600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr5:179942400-179949600 Weak transcription Spleen Spleen
32 chr5:179942600-179950000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr5:179942600-179959000 Weak transcription HepG2 liver
34 chr5:179942800-179954600 Weak transcription Fetal Intestine Large intestine
35 chr5:179943000-179949400 Weak transcription Duodenum Mucosa Duodenum
36 chr5:179943200-179949600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr5:179943200-179954000 Weak transcription Fetal Intestine Small intestine
38 chr5:179943400-179949200 Weak transcription Primary T cells fromperipheralblood blood
39 chr5:179944400-179948800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr5:179944400-179948800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr5:179945000-179948800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr5:179945200-179949600 Weak transcription Fetal Brain Male brain
43 chr5:179945200-179951600 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr5:179945400-179948800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr5:179945400-179949600 Weak transcription Fetal Lung lung
46 chr5:179945600-179953400 Weak transcription Dnd41 blood
47 chr5:179946000-179958400 Weak transcription Lung lung
48 chr5:179946200-179949200 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr5:179946200-179960800 Weak transcription NHLF lung
50 chr5:179946400-179949600 Weak transcription H9 Cell Line embryonic stem cell

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