Variant report

Variant	rs6897940
Chromosome Location	chr5:50535522-50535523
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10080044	0.93[ASN][1000 genomes]
rs10939904	0.93[ASN][1000 genomes]
rs12055073	0.92[ASN][1000 genomes]
rs12187872	0.93[ASN][1000 genomes]
rs16878699	0.86[ASN][1000 genomes]
rs2062722	0.85[ASN][1000 genomes]
rs2134251	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2202134	0.91[ASN][1000 genomes]
rs34503818	0.93[ASN][1000 genomes]
rs35603247	0.93[ASN][1000 genomes]
rs7709442	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7712418	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs924626	0.93[ASN][1000 genomes]
rs9291701	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9291725	0.86[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:50524400-50536400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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