Variant report

Variant	rs9291701
Chromosome Location	chr5:50523153-50523154
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10080044	0.97[ASN][1000 genomes]
rs10939904	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12055073	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12187872	0.94[ASN][1000 genomes]
rs16878699	0.87[ASN][1000 genomes]
rs2062722	0.88[ASN][1000 genomes]
rs2134251	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2202134	0.99[ASN][1000 genomes]
rs34503818	0.94[ASN][1000 genomes]
rs35603247	0.94[ASN][1000 genomes]
rs6897940	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7709442	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7712418	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs924626	0.94[ASN][1000 genomes]
rs9291725	0.87[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:50521400-50524400	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr5:50521600-50523800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr5:50522400-50523600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr5:50522400-50523600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr5:50522400-50523800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr5:50522400-50524000	Weak transcription	Stomach Mucosa	stomach
7	chr5:50522400-50524400	Enhancers	Hela-S3	cervix
8	chr5:50522600-50523600	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr5:50522600-50523600	Weak transcription	Fetal Heart	heart
10	chr5:50522600-50523800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr5:50522600-50523800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr5:50522600-50523800	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr5:50522800-50523800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr5:50522800-50523800	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr5:50522800-50523800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
16	chr5:50523000-50523400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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