Variant report

Variant	rs6914895
Chromosome Location	chr6:144355321-144355322
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr6:144355290-144355657	K562	blood:	n/a	chr6:144355462-144355471 chr6:144355456-144355470 chr6:144355457-144355473 chr6:144355458-144355469 chr6:144355457-144355472
2	BACH1	chr6:144355161-144355658	H1-hESC	embryonic stem cell:	n/a	n/a
3	MAFK	chr6:144355307-144355646	IMR90	lung:	n/a	chr6:144355462-144355471 chr6:144355456-144355470 chr6:144355457-144355473 chr6:144355458-144355469 chr6:144355457-144355472
4	MAFK	chr6:144355313-144355636	HepG2	liver:	n/a	chr6:144355462-144355471 chr6:144355456-144355470 chr6:144355457-144355473 chr6:144355458-144355469 chr6:144355457-144355472
5	MAFF	chr6:144355317-144355606	HepG2	liver:	n/a	chr6:144355455-144355473
6	STAT3	chr6:144355306-144355655	MCF10A-Er-Src	breast:	n/a	n/a
7	MAFK	chr6:144355304-144355641	H1-hESC	embryonic stem cell:	n/a	chr6:144355462-144355471 chr6:144355456-144355470 chr6:144355457-144355473 chr6:144355458-144355469 chr6:144355457-144355472

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:144355070..144357503-chr6:144413513..144415682,2	K562	blood:

Variant related genes	Relation type
ENSG00000217231	TF binding region

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11756126	1.00[YRI][hapmap]
rs11757814	1.00[YRI][hapmap];0.80[AFR][1000 genomes]
rs11964079	1.00[MEX][hapmap]
rs17073312	1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs17073315	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6902313	1.00[MEX][hapmap]
rs6912793	1.00[MEX][hapmap]
rs6925139	1.00[MEX][hapmap]
rs6941674	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6942039	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7744101	1.00[MEX][hapmap]
rs7773115	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3408554	chr6:144106707-144369589	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	esv3522138	chr6:144174685-144367463	Enhancers Strong transcription ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv3522139	chr6:144174685-144367463	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv830830	chr6:144177942-144380870	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144343400-144355600	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:144351000-144357400	Weak transcription	Fetal Kidney	kidney
3	chr6:144353600-144357400	Weak transcription	Right Atrium	heart
4	chr6:144354600-144357000	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr6:144354800-144355600	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr6:144355000-144355400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr6:144355000-144357400	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr6:144355200-144355400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:144355200-144355400	Enhancers	NHLF	lung
10	chr6:144355200-144355600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr6:144355200-144355600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:144355200-144355600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr6:144355200-144355600	Enhancers	Adipose Nuclei	Adipose
14	chr6:144355200-144355600	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
15	chr6:144355200-144355800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr6:144355200-144355800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr6:144355200-144355800	Flanking Active TSS	NHDF-Ad	bronchial
18	chr6:144355200-144356200	Enhancers	Osteobl	bone
19	chr6:144355200-144356400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr6:144355200-144357200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr6:144355200-144357200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr6:144355200-144357200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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