Variant report

Variant	rs6923989
Chromosome Location	chr6:5841897-5841898
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13195249	0.88[ASN][1000 genomes]
rs6904513	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6939603	1.00[JPT][hapmap]
rs9328332	0.88[ASN][1000 genomes]
rs9378984	1.00[JPT][hapmap]
rs9392090	1.00[JPT][hapmap]
rs9502353	1.00[ASN][1000 genomes]
rs9502355	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9504527	0.88[ASN][1000 genomes]
rs9504528	0.88[ASN][1000 genomes]
rs9504535	0.88[ASN][1000 genomes]
rs9504544	0.92[ASN][1000 genomes]
rs9504547	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5183	chr6:5821731-5866796	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:5840200-5842000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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