Variant report

Variant	rs6930505
Chromosome Location	chr6:114040140-114040141
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17788436	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35384158	0.82[ASN][1000 genomes]
rs35711891	0.85[ASN][1000 genomes]
rs66812545	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72954686	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9488241	0.93[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114035200-114040200	Weak transcription	HepG2	liver
2	chr6:114037000-114040400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:114039600-114040200	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr6:114039600-114040400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:114039600-114040400	Enhancers	Fetal Intestine Small	intestine
6	chr6:114039600-114040600	Enhancers	GM12878-XiMat	blood
7	chr6:114039600-114041200	Enhancers	HMEC	breast
8	chr6:114039800-114040200	Enhancers	Fetal Intestine Large	intestine
9	chr6:114039800-114041400	Enhancers	Hela-S3	cervix
10	chr6:114039800-114041400	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr6:114039800-114042000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:114040000-114040200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
13	chr6:114040000-114040800	Enhancers	Stomach Mucosa	stomach
14	chr6:114040000-114041200	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr6:114040000-114041200	Enhancers	Primary neutrophils fromperipheralblood	blood
16	chr6:114040000-114041400	Enhancers	Muscle Satellite Cultured Cells	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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