Variant report

Variant	rs35711891
Chromosome Location	chr6:114022276-114022277
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17788436	0.91[ASN][1000 genomes]
rs34966615	0.92[ASN][1000 genomes]
rs6930505	0.85[ASN][1000 genomes]
rs72954686	0.85[ASN][1000 genomes]
rs773683	0.92[ASN][1000 genomes]
rs773684	0.92[ASN][1000 genomes]
rs9488241	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981079	chr6:114021110-114039103	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114015800-114023000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr6:114016200-114023000	Weak transcription	Fetal Lung	lung
3	chr6:114021200-114023000	Weak transcription	HepG2	liver
4	chr6:114022000-114022600	Enhancers	Pancreas	Pancrea
5	chr6:114022000-114024000	Enhancers	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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