The 2.0 version of rSNPBase

Variant report

Variant rs6936285
Chromosome Location chr6:14127554-14127555
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:14118600-14134600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr6:14118800-14128000 Weak transcription Fetal Stomach stomach
3 chr6:14118800-14128400 Weak transcription Thymus Thymus
4 chr6:14118800-14129400 Weak transcription Fetal Intestine Small intestine
5 chr6:14118800-14129600 Weak transcription Brain Angular Gyrus brain
6 chr6:14118800-14130000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:14119000-14127800 Weak transcription Stomach Smooth Muscle stomach
8 chr6:14119000-14128200 Weak transcription Rectal Smooth Muscle rectum
9 chr6:14119000-14128400 Weak transcription Fetal Muscle Leg muscle
10 chr6:14119000-14131600 Weak transcription Lung lung
11 chr6:14119000-14134600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr6:14119000-14144800 Weak transcription Left Ventricle heart
13 chr6:14119200-14127800 Weak transcription Brain Hippocampus Middle brain
14 chr6:14119200-14127800 Weak transcription Colon Smooth Muscle Colon
15 chr6:14119200-14129200 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr6:14119200-14129600 Weak transcription Brain Cingulate Gyrus brain
17 chr6:14119400-14129400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr6:14119400-14129400 Weak transcription Fetal Brain Male brain
19 chr6:14119400-14130400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr6:14119400-14131600 Weak transcription Primary T cells fromperipheralblood blood
21 chr6:14119400-14133000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr6:14119400-14135800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr6:14119600-14128000 Weak transcription Fetal Lung lung
24 chr6:14119600-14134600 Weak transcription Duodenum Mucosa Duodenum
25 chr6:14119800-14128800 Weak transcription Fetal Kidney kidney
26 chr6:14119800-14134600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr6:14120800-14134800 Genic enhancers Primary B cells from peripheral blood blood
28 chr6:14121000-14128600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:14121000-14130200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr6:14122600-14131400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr6:14122600-14134800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr6:14122800-14128000 Weak transcription Dnd41 blood
33 chr6:14122800-14128200 Weak transcription K562 blood
34 chr6:14122800-14130000 Weak transcription Spleen Spleen
35 chr6:14124600-14129400 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr6:14124600-14131400 Genic enhancers Primary B cells from cord blood blood
37 chr6:14124600-14132800 Weak transcription Primary hematopoietic stem cells blood
38 chr6:14124600-14141400 Weak transcription Brain Substantia Nigra brain
39 chr6:14124800-14128000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr6:14124800-14128400 Weak transcription Psoas Muscle Psoas
41 chr6:14124800-14129800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:14124800-14131600 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr6:14125000-14129600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:14125000-14132200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr6:14125400-14128400 Weak transcription Fetal Thymus thymus
46 chr6:14126200-14131200 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:14126400-14137000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
48 chr6:14126800-14127800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:14126800-14128400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr6:14126800-14129200 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015