The 2.0 version of rSNPBase

Variant report

Variant rs6942069
Chromosome Location chr6:144899722-144899723
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144807400-144904000 Weak transcription Brain Substantia Nigra brain
2 chr6:144850400-144903200 Weak transcription H1 Cell Line embryonic stem cell
3 chr6:144850400-144903200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:144850400-144904200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:144857200-144904000 Weak transcription Psoas Muscle Psoas
6 chr6:144867400-144903800 Weak transcription Rectal Smooth Muscle rectum
7 chr6:144872000-144903000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr6:144873000-144903200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr6:144873000-144903800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr6:144874000-144904200 Weak transcription Placenta Placenta
11 chr6:144877000-144903000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:144877000-144904200 Weak transcription Fetal Stomach stomach
13 chr6:144878000-144903400 Weak transcription Fetal Brain Male brain
14 chr6:144878600-144901200 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr6:144879200-144899800 Weak transcription NHLF lung
16 chr6:144879200-144904000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr6:144881800-144900000 Weak transcription Muscle Satellite Cultured Cells --
18 chr6:144881800-144937800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:144882000-144902800 Weak transcription Fetal Heart heart
20 chr6:144885400-144903800 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:144885800-144943400 Weak transcription Ovary ovary
22 chr6:144888600-144903200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr6:144888800-144904000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr6:144889200-144903000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr6:144891400-144900200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr6:144895200-144904000 Weak transcription H9 Cell Line embryonic stem cell
27 chr6:144895600-144902800 Strong transcription Primary B cells from cord blood blood
28 chr6:144895800-144901600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:144896000-144900000 Weak transcription NHEK skin
30 chr6:144896400-144901800 Strong transcription Primary hematopoietic stem cells blood
31 chr6:144896400-144902200 Strong transcription Primary T cells fromperipheralblood blood
32 chr6:144896600-144903000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr6:144896600-144903200 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr6:144896600-144903800 Weak transcription Brain Anterior Caudate brain
35 chr6:144896800-144903200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr6:144897000-144903200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr6:144897400-144901400 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr6:144897400-144904000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:144897800-144899800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr6:144897800-144900800 Strong transcription Primary B cells from peripheral blood blood
41 chr6:144897800-144902000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:144897800-144902200 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr6:144897800-144902200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:144897800-144902200 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr6:144898000-144899800 Strong transcription Fetal Muscle Trunk muscle
46 chr6:144898000-144899800 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr6:144898000-144900000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:144898000-144900000 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr6:144898000-144900000 Strong transcription Duodenum Mucosa Duodenum
50 chr6:144898000-144900000 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015