Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143707751..143710016-chr6:143717710..143720535,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AIG1-6	chr6:143707718-143707918	NONHSAT115345

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11962852	1.00[CEU][hapmap]
rs17072445	1.00[CEU][hapmap]
rs2328476	0.85[AMR][1000 genomes]
rs28549222	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56904665	0.81[AMR][1000 genomes]
rs6909810	0.85[AMR][1000 genomes]
rs6911274	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937122	0.85[AMR][1000 genomes]
rs73578682	1.00[EUR][1000 genomes]
rs742378	1.00[EUR][1000 genomes]
rs7738987	1.00[CEU][hapmap]
rs7742447	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7758219	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7760371	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9321903	0.81[EUR][1000 genomes]
rs9484739	1.00[EUR][1000 genomes]
rs9484740	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9484741	1.00[EUR][1000 genomes]
rs9496603	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9496607	0.81[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143706600-143757400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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