Variant report

Variant	rs9496603
Chromosome Location	chr6:143702013-143702014
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143701463..143703254-chr6:143713766..143715572,2	MCF-7	breast:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1121170	0.90[EUR][1000 genomes]
rs11962852	1.00[CEU][hapmap]
rs17072445	1.00[CEU][hapmap]
rs17072465	0.90[EUR][1000 genomes]
rs17072476	0.90[EUR][1000 genomes]
rs2328476	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28549222	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56391042	0.90[EUR][1000 genomes]
rs56904665	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6909810	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6911274	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6917977	0.90[EUR][1000 genomes]
rs6927966	0.85[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs6937122	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6937436	0.90[EUR][1000 genomes]
rs6942294	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73578682	0.81[EUR][1000 genomes]
rs742378	0.81[EUR][1000 genomes]
rs7738987	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs7742447	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7758219	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7760371	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9321903	1.00[EUR][1000 genomes]
rs9484739	0.81[EUR][1000 genomes]
rs9484740	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9484741	0.81[EUR][1000 genomes]
rs9496607	1.00[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143702000-143703600	Weak transcription	Aorta	Aorta

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