Variant report

Variant	rs1121170
Chromosome Location	chr6:143680444-143680445
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10872558	0.93[ASN][1000 genomes]
rs17072445	1.00[ASN][1000 genomes]
rs17072465	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17072476	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2328476	1.00[EUR][1000 genomes]
rs4896643	0.93[ASN][1000 genomes]
rs4896646	0.82[ASN][1000 genomes]
rs56391042	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56904665	1.00[EUR][1000 genomes]
rs6909810	1.00[EUR][1000 genomes]
rs6917977	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6927966	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937122	1.00[EUR][1000 genomes]
rs6937436	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7738987	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9321903	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9484731	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496603	0.90[EUR][1000 genomes]
rs9496607	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
2	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:143676400-143682600	Weak transcription	Left Ventricle	heart
4	chr6:143678400-143683000	Weak transcription	Ovary	ovary
5	chr6:143678600-143683800	Weak transcription	Fetal Stomach	stomach
6	chr6:143679400-143682800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:143679400-143684200	Weak transcription	Fetal Lung	lung
8	chr6:143679600-143682600	Weak transcription	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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