Variant report

Variant	rs2328476
Chromosome Location	chr6:143696690-143696691
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1121170	1.00[EUR][1000 genomes]
rs17072465	1.00[EUR][1000 genomes]
rs17072476	1.00[EUR][1000 genomes]
rs28549222	0.85[AMR][1000 genomes]
rs56391042	1.00[EUR][1000 genomes]
rs56904665	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6909810	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911274	0.85[AMR][1000 genomes]
rs6917977	1.00[EUR][1000 genomes]
rs6927966	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6937122	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937436	1.00[EUR][1000 genomes]
rs6942294	0.85[AMR][1000 genomes]
rs7738987	1.00[EUR][1000 genomes]
rs9321903	0.90[EUR][1000 genomes]
rs9496603	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9496607	0.90[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143694200-143697000	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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