Variant report

Variant	rs6917977
Chromosome Location	chr6:143676495-143676496
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10872558	0.90[ASN][1000 genomes]
rs1121170	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17072445	0.97[ASN][1000 genomes]
rs17072465	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17072476	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2328476	1.00[EUR][1000 genomes]
rs4896643	0.90[ASN][1000 genomes]
rs4896646	0.80[ASN][1000 genomes]
rs56391042	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56904665	1.00[EUR][1000 genomes]
rs6909810	1.00[EUR][1000 genomes]
rs6927966	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6937122	1.00[EUR][1000 genomes]
rs6937436	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7738987	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9321903	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9484731	0.97[ASN][1000 genomes]
rs9496603	0.90[EUR][1000 genomes]
rs9496607	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
2	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:143675600-143676600	Strong transcription	Liver	Liver
4	chr6:143676200-143676800	ZNF genes & repeats	Fetal Intestine Small	intestine
5	chr6:143676400-143677000	ZNF genes & repeats	Fetal Intestine Large	intestine
6	chr6:143676400-143682600	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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