Variant report

Variant	rs9484731
Chromosome Location	chr6:143667179-143667180
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10872558	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs1121170	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11962852	1.00[CEU][hapmap]
rs17072445	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17072465	0.97[ASN][1000 genomes]
rs17072476	0.97[ASN][1000 genomes]
rs4896643	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs4896646	0.82[ASN][1000 genomes]
rs56391042	0.97[ASN][1000 genomes]
rs6917977	0.97[ASN][1000 genomes]
rs6927966	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6937436	0.97[ASN][1000 genomes]
rs7738987	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9321903	0.87[ASN][1000 genomes]
rs9496552	1.00[CHB][hapmap]
rs9496607	0.87[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143654000-143672000	Weak transcription	Ovary	ovary
4	chr6:143654400-143667800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:143655600-143667200	Weak transcription	Adipose Nuclei	Adipose
6	chr6:143658200-143667200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:143658400-143670200	Weak transcription	NHDF-Ad	bronchial
8	chr6:143658600-143667200	Weak transcription	NH-A	brain
9	chr6:143658800-143669400	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr6:143659400-143668400	Weak transcription	Fetal Intestine Small	intestine
11	chr6:143660800-143667200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:143661000-143667200	Weak transcription	Osteobl	bone
13	chr6:143661000-143669400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:143661400-143667200	Weak transcription	HMEC	breast
15	chr6:143662800-143675600	Weak transcription	Liver	Liver
16	chr6:143663000-143667200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr6:143663000-143670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr6:143666200-143667800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links