The 2.0 version of rSNPBase

Variant report

Variant rs6943180
Chromosome Location chr7:140287835-140287836
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:140247000-140297400 Weak transcription Spleen Spleen
2 chr7:140263800-140303600 Weak transcription H9 Cell Line embryonic stem cell
3 chr7:140263800-140303600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr7:140263800-140305200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr7:140263800-140305600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr7:140264600-140290400 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr7:140265200-140304400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr7:140267800-140290600 Weak transcription Rectal Smooth Muscle rectum
9 chr7:140267800-140291200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr7:140267800-140300800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr7:140267800-140326000 Weak transcription Gastric stomach
12 chr7:140269400-140306600 Weak transcription Right Atrium heart
13 chr7:140274000-140301400 Weak transcription Right Ventricle heart
14 chr7:140276400-140288200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr7:140276600-140296200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr7:140276800-140291400 Strong transcription Fetal Stomach stomach
17 chr7:140279400-140288000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr7:140279800-140302000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr7:140280600-140288400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr7:140281000-140288400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr7:140281200-140288200 Strong transcription Brain Germinal Matrix brain
22 chr7:140281400-140294600 Weak transcription Fetal Intestine Small intestine
23 chr7:140281600-140306400 Weak transcription Brain Angular Gyrus brain
24 chr7:140281800-140304200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr7:140285800-140297400 Weak transcription NHDF-Ad bronchial
26 chr7:140285800-140301400 Weak transcription Left Ventricle heart
27 chr7:140285800-140306400 Weak transcription Colon Smooth Muscle Colon
28 chr7:140286000-140304000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr7:140286600-140288000 Strong transcription Fetal Lung lung
30 chr7:140286600-140299800 Weak transcription Placenta Amnion Placenta Amnion
31 chr7:140286600-140300000 Weak transcription Fetal Intestine Large intestine
32 chr7:140287000-140288000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr7:140287000-140299600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr7:140287200-140289200 Strong transcription Fetal Muscle Leg muscle
35 chr7:140287200-140295800 Weak transcription Brain Anterior Caudate brain
36 chr7:140287200-140296200 Weak transcription NH-A brain
37 chr7:140287400-140288400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr7:140287400-140288400 Strong transcription Fetal Muscle Trunk muscle
39 chr7:140287400-140291200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr7:140287400-140292800 Weak transcription Fetal Kidney kidney
41 chr7:140287400-140295600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr7:140287400-140300000 Weak transcription Brain Hippocampus Middle brain
43 chr7:140287400-140301400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr7:140287400-140301400 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr7:140287600-140289000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr7:140287600-140291000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr7:140287600-140293800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr7:140287600-140294200 Weak transcription Ovary ovary
49 chr7:140287600-140295200 Weak transcription NHLF lung
50 chr7:140287600-140295400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015