The 2.0 version of rSNPBase

Variant report

Variant rs9942679
Chromosome Location chr7:140281503-140281504
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:140247000-140297400 Weak transcription Spleen Spleen
2 chr7:140261800-140284000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr7:140263800-140286800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr7:140263800-140303600 Weak transcription H9 Cell Line embryonic stem cell
5 chr7:140263800-140303600 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr7:140263800-140305200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr7:140263800-140305600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr7:140264600-140290400 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr7:140265200-140304400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr7:140266400-140285200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr7:140267800-140283000 Weak transcription Liver Liver
12 chr7:140267800-140285000 Weak transcription Colon Smooth Muscle Colon
13 chr7:140267800-140285000 Weak transcription NH-A brain
14 chr7:140267800-140290600 Weak transcription Rectal Smooth Muscle rectum
15 chr7:140267800-140291200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr7:140267800-140300800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr7:140267800-140326000 Weak transcription Gastric stomach
18 chr7:140269400-140282000 Weak transcription Lung lung
19 chr7:140269400-140306600 Weak transcription Right Atrium heart
20 chr7:140272200-140287000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr7:140273600-140284200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr7:140273600-140285000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr7:140273800-140282200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr7:140273800-140285800 Weak transcription Fetal Brain Male brain
25 chr7:140274000-140284200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr7:140274000-140284800 Weak transcription Fetal Kidney kidney
27 chr7:140274000-140285200 Weak transcription Fetal Intestine Large intestine
28 chr7:140274000-140301400 Weak transcription Right Ventricle heart
29 chr7:140274200-140284200 Weak transcription Placenta Placenta
30 chr7:140274200-140284200 Weak transcription Ovary ovary
31 chr7:140276400-140288200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr7:140276600-140287800 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr7:140276600-140296200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:140276800-140282400 Weak transcription Small Intestine intestine
35 chr7:140276800-140287000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr7:140276800-140287200 Weak transcription Duodenum Mucosa Duodenum
37 chr7:140276800-140291400 Strong transcription Fetal Stomach stomach
38 chr7:140277800-140287000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr7:140278200-140281800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr7:140278800-140287000 Weak transcription Fetal Heart heart
41 chr7:140279400-140288000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr7:140279600-140287800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr7:140279800-140302000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr7:140280600-140288400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr7:140281000-140281600 Enhancers Brain Angular Gyrus brain
46 chr7:140281000-140281600 Genic enhancers Brain Cingulate Gyrus brain
47 chr7:140281000-140281800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr7:140281000-140281800 Enhancers Brain Substantia Nigra brain
49 chr7:140281000-140281800 Genic enhancers Fetal Muscle Leg muscle
50 chr7:140281000-140282600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015