Variant report

Variant	rs695110
Chromosome Location	chr11:75456581-75456582
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10160784	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10899118	0.83[ASN][1000 genomes]
rs1219549	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1219550	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2168947	0.81[ASN][1000 genomes]
rs498936	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs499974	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs531117	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs559355	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs600518	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs600626	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs643884	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs644361	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs656095	0.87[AMR][1000 genomes]
rs673335	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3381903	chr11:75123498-75587233	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	81 gene(s)	inside rSNPs	diseases
2	nsv897924	chr11:75424546-75678647	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv897925	chr11:75456134-75556323	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75453800-75458000	Enhancers	Fetal Heart	heart
2	chr11:75454000-75456800	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr11:75454000-75457000	Enhancers	Left Ventricle	heart
4	chr11:75454800-75457400	Enhancers	Right Atrium	heart
5	chr11:75454800-75458200	Enhancers	Right Ventricle	heart
6	chr11:75455200-75457800	Weak transcription	Stomach Mucosa	stomach
7	chr11:75455600-75456800	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr11:75455600-75457000	Weak transcription	Fetal Muscle Trunk	muscle
9	chr11:75455600-75458400	Enhancers	HepG2	liver
10	chr11:75455600-75459400	Weak transcription	K562	blood
11	chr11:75456000-75457000	Weak transcription	Liver	Liver
12	chr11:75456200-75457200	Weak transcription	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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