Variant report

Variant	rs6957588
Chromosome Location	chr7:14454065-14454066
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10239079	0.82[CHB][hapmap]
rs10242478	0.82[CHB][hapmap];0.83[ASN][1000 genomes]
rs10267135	0.83[ASN][1000 genomes]
rs10950524	0.98[ASN][1000 genomes]
rs12666188	0.83[ASN][1000 genomes]
rs12668508	0.83[ASN][1000 genomes]
rs12670156	0.82[CHB][hapmap]
rs17168223	0.82[CHB][hapmap]
rs196747	0.82[CHB][hapmap];0.88[ASN][1000 genomes]
rs196754	0.82[CHB][hapmap]
rs196763	0.82[CHB][hapmap];0.88[ASN][1000 genomes]
rs4721339	1.00[CHB][hapmap]
rs73282311	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14453400-14454400	Enhancers	Fetal Heart	heart
2	chr7:14453800-14454200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:14454000-14454200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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