Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10239079	0.94[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap]
rs10239634	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10242478	0.94[AMR][1000 genomes]
rs10267135	0.94[AMR][1000 genomes]
rs10950523	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs10950524	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11761226	0.82[JPT][hapmap]
rs12666188	0.94[AMR][1000 genomes]
rs12668508	0.94[AMR][1000 genomes]
rs12671101	1.00[EUR][1000 genomes]
rs17168223	0.87[CHD][hapmap];1.00[GIH][hapmap]
rs171927	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs196747	0.94[AMR][1000 genomes]
rs196749	1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs196752	0.83[CHD][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs196759	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs196763	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2060159	0.82[JPT][hapmap]
rs2060161	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4721333	1.00[EUR][1000 genomes]
rs6461095	0.85[JPT][hapmap]
rs6461098	0.85[CHB][hapmap];0.85[JPT][hapmap]
rs6943504	0.82[ASN][1000 genomes]
rs6957588	0.82[CHB][hapmap]
rs6971925	0.85[CHB][hapmap];0.85[JPT][hapmap];0.86[MEX][hapmap]
rs73282311	0.94[AMR][1000 genomes]
rs73282318	0.94[AMR][1000 genomes]
rs73282321	0.94[AMR][1000 genomes]
rs73285809	0.88[AMR][1000 genomes]
rs7782300	0.86[AMR][1000 genomes]
rs969596	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1848567	chr7:14464118-14579801	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv971153	chr7:14468435-14473759	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv887707	chr7:14471682-14576163	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14470600-14473200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:14471800-14473200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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