Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10239634	0.83[ASN][1000 genomes]
rs10243451	0.92[YRI][hapmap]
rs10950522	0.82[YRI][hapmap]
rs10950523	1.00[JPT][hapmap]
rs11761226	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12532527	0.85[YRI][hapmap]
rs12535183	0.92[YRI][hapmap]
rs1560575	0.92[YRI][hapmap]
rs196749	0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs196752	0.82[JPT][hapmap];1.00[EUR][1000 genomes]
rs196754	0.82[JPT][hapmap]
rs2060161	0.86[CHB][hapmap];0.88[JPT][hapmap];0.91[ASN][1000 genomes]
rs6461092	0.92[YRI][hapmap]
rs6461095	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6461098	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs6962861	0.96[YRI][hapmap]
rs6971925	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs7780569	0.92[YRI][hapmap]
rs891808	0.83[YRI][hapmap]
rs969596	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14441600-14442800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr7:14442200-14442600	Enhancers	HSMMtube	muscle
3	chr7:14442200-14443600	Weak transcription	Muscle Satellite Cultured Cells	--

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