Variant report

Variant	rs10950522
Chromosome Location	chr7:14443035-14443036
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10228053	0.86[YRI][hapmap]
rs10499440	0.85[CEU][hapmap]
rs11526188	0.85[CEU][hapmap]
rs11977908	0.85[CEU][hapmap]
rs12673303	0.86[EUR][1000 genomes]
rs12674246	0.86[EUR][1000 genomes]
rs1431523	0.83[EUR][1000 genomes]
rs17168203	0.85[CEU][hapmap]
rs17651138	0.85[CEU][hapmap]
rs17651211	0.85[CEU][hapmap]
rs2060159	0.82[YRI][hapmap]
rs2060160	0.86[EUR][1000 genomes]
rs6461092	0.81[YRI][hapmap]
rs9639198	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14442200-14443600	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr7:14443000-14443600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr7:14443000-14443600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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