Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10239634	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10242478	0.94[AMR][1000 genomes]
rs10267135	0.94[AMR][1000 genomes]
rs10950524	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12666188	0.94[AMR][1000 genomes]
rs12668508	0.94[AMR][1000 genomes]
rs12671101	1.00[EUR][1000 genomes]
rs171927	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs196747	0.94[AMR][1000 genomes]
rs196749	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs196752	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs196754	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs196763	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2060161	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4721333	1.00[EUR][1000 genomes]
rs6943504	0.81[ASN][1000 genomes]
rs73282311	0.94[AMR][1000 genomes]
rs73282318	0.94[AMR][1000 genomes]
rs73282321	0.94[AMR][1000 genomes]
rs73285809	0.88[AMR][1000 genomes]
rs7782300	0.86[AMR][1000 genomes]
rs969596	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14454200-14462400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:14459200-14460800	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr7:14459600-14465000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr7:14459600-14465200	Weak transcription	Fetal Heart	heart
5	chr7:14460200-14460800	Enhancers	Fetal Lung	lung
6	chr7:14460400-14460800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:14460400-14460800	Enhancers	Liver	Liver
8	chr7:14460400-14460800	Enhancers	Esophagus	oesophagus
9	chr7:14460400-14461000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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