Variant report

Variant	rs4721339
Chromosome Location	chr7:14511609-14511610
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:14503536..14506450-chr7:14511181..14513157,3	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10239079	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10239634	0.94[AMR][1000 genomes]
rs10242478	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10267135	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10499448	1.00[YRI][hapmap]
rs10499451	1.00[YRI][hapmap]
rs10950524	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12537358	1.00[YRI][hapmap]
rs12537383	1.00[YRI][hapmap]
rs12538204	1.00[YRI][hapmap]
rs12666188	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12666606	1.00[YRI][hapmap]
rs12667053	1.00[YRI][hapmap]
rs12668508	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12670156	1.00[CHB][hapmap]
rs12671101	1.00[JPT][hapmap]
rs17168223	1.00[CHB][hapmap];0.95[ASN][1000 genomes]
rs17168227	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs17168255	1.00[YRI][hapmap]
rs17168261	1.00[YRI][hapmap]
rs17168263	1.00[YRI][hapmap]
rs171927	0.94[AMR][1000 genomes]
rs196747	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs196749	0.82[AMR][1000 genomes]
rs196752	0.84[AMR][1000 genomes]
rs196754	0.94[AMR][1000 genomes]
rs196759	0.94[AMR][1000 genomes]
rs196763	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1991690	1.00[YRI][hapmap]
rs2060161	0.81[AMR][1000 genomes]
rs6957588	1.00[CHB][hapmap];0.83[ASN][1000 genomes]
rs73282311	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73282318	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73282321	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73285809	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7782300	0.85[CHB][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes]
rs969596	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1848567	chr7:14464118-14579801	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv887707	chr7:14471682-14576163	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv887708	chr7:14494508-14617982	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv3384412	chr7:14509518-14511992	Inactive region	Chromatin interactive region	n/a	n/a	diseases
7	esv1800100	chr7:14511454-14564068	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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