Variant report

Variant	rs6959421
Chromosome Location	chr7:116667186-116667187
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:116666668..116671169-chr7:116672583..116677847,7	K562	blood:
2	chr7:116664783..116668048-chr7:116669949..116672969,4	MCF-7	breast:
3	chr7:116661033..116663494-chr7:116665677..116669530,5	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10953833	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11760206	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11762090	1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs4282507	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4509243	0.81[AFR][1000 genomes]
rs6951094	1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6961972	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9641573	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs9770475	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9969267	1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.85[AMR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116661000-116669400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:116661600-116670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:116661800-116668600	Weak transcription	Fetal Muscle Trunk	muscle
4	chr7:116662000-116675200	Weak transcription	Fetal Stomach	stomach
5	chr7:116663600-116670600	Weak transcription	Fetal Lung	lung
6	chr7:116663800-116668400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr7:116664000-116670800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr7:116664800-116667200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:116664800-116667200	Enhancers	Fetal Heart	heart
10	chr7:116665400-116667200	Enhancers	NHDF-Ad	bronchial
11	chr7:116665400-116670400	Weak transcription	Brain Hippocampus Middle	brain
12	chr7:116665800-116668600	Weak transcription	Fetal Brain Female	brain
13	chr7:116665800-116680600	Weak transcription	Osteobl	bone
14	chr7:116666200-116667200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr7:116666200-116680400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr7:116666600-116667200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr7:116666600-116667200	Enhancers	Left Ventricle	heart
18	chr7:116666600-116667200	Genic enhancers	K562	blood
19	chr7:116666800-116667200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr7:116666800-116673800	Weak transcription	Pancreas	Pancrea
21	chr7:116667000-116671200	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr7:116667000-116671200	Weak transcription	Fetal Brain Male	brain
23	chr7:116667000-116673800	Weak transcription	Right Atrium	heart
24	chr7:116667000-116674000	Weak transcription	HUVEC	blood vessel
25	chr7:116667000-116681000	Weak transcription	NH-A	brain

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