Variant report

Variant	rs9969267
Chromosome Location	chr7:116681127-116681128
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116673925..116679714-chr7:116680423..116685011,12	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10953833	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11760206	1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11762090	1.00[YRI][hapmap];0.97[AFR][1000 genomes]
rs4282507	1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6951094	1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6959421	1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6961972	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs9641573	0.88[AFR][1000 genomes]
rs9770475	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116674200-116685400	Weak transcription	HMEC	breast
2	chr7:116674800-116686000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr7:116675200-116683200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr7:116675400-116685400	Weak transcription	Left Ventricle	heart
5	chr7:116675400-116691800	Weak transcription	Ovary	ovary
6	chr7:116676400-116687400	Weak transcription	Fetal Stomach	stomach
7	chr7:116676400-116688600	Weak transcription	Psoas Muscle	Psoas
8	chr7:116676600-116685000	Weak transcription	K562	blood
9	chr7:116676600-116688400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr7:116676800-116687600	Weak transcription	Fetal Lung	lung
11	chr7:116677000-116685800	Weak transcription	Colon Smooth Muscle	Colon
12	chr7:116677000-116688200	Weak transcription	Small Intestine	intestine
13	chr7:116677200-116683600	Weak transcription	HSMMtube	muscle
14	chr7:116677200-116685800	Weak transcription	Fetal Heart	heart
15	chr7:116677200-116686400	Weak transcription	Fetal Brain Female	brain
16	chr7:116677200-116691200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr7:116677400-116681800	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr7:116677400-116686200	Weak transcription	Fetal Muscle Leg	muscle
19	chr7:116677400-116686600	Weak transcription	Fetal Brain Male	brain
20	chr7:116677600-116681200	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr7:116677600-116683400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr7:116677600-116685600	Weak transcription	Brain Hippocampus Middle	brain
23	chr7:116677600-116691400	Weak transcription	Aorta	Aorta
24	chr7:116678800-116687200	Weak transcription	Brain Germinal Matrix	brain
25	chr7:116680000-116683800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr7:116680200-116681200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr7:116680200-116684800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr7:116680400-116681400	Genic enhancers	GM12878-XiMat	blood
29	chr7:116680400-116681600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr7:116680600-116682200	Enhancers	Osteobl	bone
31	chr7:116680800-116682200	Enhancers	Muscle Satellite Cultured Cells	--
32	chr7:116680800-116682200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr7:116681000-116681200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr7:116681000-116681200	Flanking Active TSS	NHDF-Ad	bronchial
35	chr7:116681000-116681200	Enhancers	NHLF	lung
36	chr7:116681000-116681400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
37	chr7:116681000-116681400	Enhancers	NH-A	brain
38	chr7:116681000-116684200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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