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Variant report
Variant
rs6970753
Chromosome Location
chr7:103996499-103996500
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:103994443..103997481-chr7:104000926..104004023,3
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 8 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:7)
rs_ID
r
2
[population]
rs10240925
0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10280803
0.83[AMR][1000 genomes]
rs12534139
0.95[ASN][1000 genomes]
rs12539370
0.94[ASN][1000 genomes]
rs2188492
0.98[ASN][1000 genomes]
rs60623501
0.98[ASN][1000 genomes]
rs6958831
0.90[CHB][hapmap];0.85[AMR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv608067
chr7:103944237-104029408
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription
TF binding regionCpG islandChromatin interactive region
2 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links