The 2.0 version of rSNPBase

Variant report

Variant rs6992270
Chromosome Location chr8:131349216-131349217
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:131315600-131353400 Weak transcription Dnd41 blood
2 chr8:131330200-131353400 Weak transcription Aorta Aorta
3 chr8:131336000-131350200 Weak transcription Fetal Brain Female brain
4 chr8:131336800-131353400 Weak transcription Hela-S3 cervix
5 chr8:131337200-131358200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr8:131337400-131350800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr8:131338400-131350200 Enhancers Cortex derived primary cultured neurospheres brain
8 chr8:131338400-131362400 Weak transcription Fetal Intestine Large intestine
9 chr8:131339600-131351000 Weak transcription Lung lung
10 chr8:131339600-131354200 Weak transcription Placenta Amnion Placenta Amnion
11 chr8:131339800-131357800 Weak transcription Esophagus oesophagus
12 chr8:131340400-131363200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr8:131341000-131350200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr8:131342600-131357600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr8:131342800-131355000 Weak transcription Pancreas Pancrea
16 chr8:131343000-131350800 Weak transcription HepG2 liver
17 chr8:131343000-131351000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr8:131343000-131351000 Weak transcription HMEC breast
19 chr8:131343600-131350600 Enhancers HUES48 Cell Line embryonic stem cell
20 chr8:131343800-131350800 Weak transcription Thymus Thymus
21 chr8:131343800-131359200 Weak transcription Rectal Smooth Muscle rectum
22 chr8:131344000-131350200 Enhancers Primary T helper cells PMA-I stimulated --
23 chr8:131344400-131350800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr8:131344800-131351000 Weak transcription NH-A brain
25 chr8:131344800-131359200 Weak transcription Fetal Lung lung
26 chr8:131345600-131351200 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr8:131345800-131349600 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr8:131346000-131350200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr8:131346000-131351200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr8:131346400-131350200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr8:131346400-131350800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr8:131346400-131350800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr8:131346400-131351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr8:131346400-131353400 Weak transcription Fetal Muscle Trunk muscle
35 chr8:131346400-131368800 Weak transcription Fetal Intestine Small intestine
36 chr8:131346600-131350000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr8:131346600-131352200 Weak transcription Fetal Thymus thymus
38 chr8:131347200-131349400 Enhancers Psoas Muscle Psoas
39 chr8:131347200-131350000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr8:131347200-131351400 Enhancers HUES6 Cell Line embryonic stem cell
41 chr8:131347400-131350000 Weak transcription Primary hematopoietic stem cells blood
42 chr8:131347400-131350600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr8:131347400-131350600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr8:131347400-131353800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr8:131347600-131350400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr8:131347600-131350600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr8:131347600-131352000 Weak transcription Primary B cells from cord blood blood
48 chr8:131347600-131357800 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr8:131347600-131368000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr8:131347800-131349600 Weak transcription NHEK skin

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Last update: Aug 31, 2015