Variant report

Variant	rs7019435
Chromosome Location	chr9:86133630-86133631
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10120060	0.86[EUR][1000 genomes]
rs10868023	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs3860929	0.85[EUR][1000 genomes]
rs4097648	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4877256	0.86[EUR][1000 genomes]
rs4877772	0.85[EUR][1000 genomes]
rs6559727	0.83[EUR][1000 genomes]
rs7023693	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7032223	0.85[EUR][1000 genomes]
rs7041666	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7043389	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7043959	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7855304	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893512	chr9:86022215-86323309	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv1038884	chr9:86089963-86215800	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86114800-86145800	Weak transcription	Aorta	Aorta
2	chr9:86115200-86141000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr9:86128000-86135600	Weak transcription	Psoas Muscle	Psoas
4	chr9:86129800-86141800	Weak transcription	Left Ventricle	heart
5	chr9:86133200-86135000	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr9:86133400-86135000	Weak transcription	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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