Variant report

Variant	rs7082391
Chromosome Location	chr10:18660471-18660472
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10741039	0.96[ASN][1000 genomes]
rs10741041	0.98[ASN][1000 genomes]
rs10828598	0.91[ASN][1000 genomes]
rs10828608	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11013835	0.81[EUR][1000 genomes]
rs1325993	0.93[ASN][1000 genomes]
rs1325995	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2031570	0.98[ASN][1000 genomes]
rs6482355	0.95[ASN][1000 genomes]
rs6482368	0.95[ASN][1000 genomes]
rs7072277	0.98[ASN][1000 genomes]
rs7913836	0.94[ASN][1000 genomes]
rs7919809	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046458	chr10:18629603-18683860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18639600-18661400	Weak transcription	Aorta	Aorta
2	chr10:18652400-18667400	Weak transcription	Left Ventricle	heart
3	chr10:18658000-18664800	Weak transcription	Fetal Heart	heart
4	chr10:18659400-18676000	Weak transcription	Right Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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