Variant report

Variant	rs7099740
Chromosome Location	chr10:95500707-95500708
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10882327	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11187644	0.82[EUR][1000 genomes]
rs2095889	0.81[EUR][1000 genomes]
rs2095890	0.91[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs2095891	0.83[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs3758534	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7069934	0.82[ASN][1000 genomes]
rs7894449	0.83[EUR][1000 genomes]
rs7913442	0.91[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3346948	chr10:95421957-95532625	Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95496200-95506600	Weak transcription	Brain Anterior Caudate	brain
2	chr10:95500600-95502200	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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