Variant report

Variant	rs7100737
Chromosome Location	chr10:4570438-4570439
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:4569855..4572321-chr10:4573462..4575585,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10450517	0.91[EUR][1000 genomes]
rs10751977	0.91[EUR][1000 genomes]
rs10795178	0.88[EUR][1000 genomes]
rs10795179	0.89[EUR][1000 genomes]
rs10795181	0.84[EUR][1000 genomes]
rs11252572	0.85[EUR][1000 genomes]
rs11252574	0.85[EUR][1000 genomes]
rs11596234	0.85[EUR][1000 genomes]
rs12573114	0.91[EUR][1000 genomes]
rs12573152	0.84[EUR][1000 genomes]
rs17133097	0.85[EUR][1000 genomes]
rs17133099	0.85[EUR][1000 genomes]
rs1904664	0.80[EUR][1000 genomes]
rs4242770	0.91[EUR][1000 genomes]
rs4278426	0.88[EUR][1000 genomes]
rs4313471	0.91[EUR][1000 genomes]
rs4414116	0.91[EUR][1000 genomes]
rs4457647	0.88[EUR][1000 genomes]
rs4511194	0.89[EUR][1000 genomes]
rs4551658	0.89[EUR][1000 genomes]
rs4881324	0.91[EUR][1000 genomes]
rs4881325	0.91[EUR][1000 genomes]
rs61831305	0.93[EUR][1000 genomes]
rs61831306	0.85[EUR][1000 genomes]
rs61831307	0.85[EUR][1000 genomes]
rs6601847	0.91[EUR][1000 genomes]
rs6601848	0.91[EUR][1000 genomes]
rs6601849	0.92[EUR][1000 genomes]
rs6601850	0.92[EUR][1000 genomes]
rs7074882	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7093366	0.90[EUR][1000 genomes]
rs7099047	0.85[EUR][1000 genomes]
rs7894388	0.91[EUR][1000 genomes]
rs7896083	0.85[EUR][1000 genomes]
rs7898372	0.90[EUR][1000 genomes]
rs7904235	0.91[EUR][1000 genomes]
rs7910326	0.91[EUR][1000 genomes]
rs7910431	0.91[EUR][1000 genomes]
rs7917686	0.91[EUR][1000 genomes]
rs9329310	0.91[EUR][1000 genomes]
rs9663550	0.90[EUR][1000 genomes]
rs998239	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894787	chr10:4385379-4857717	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv549862	chr10:4554018-4593307	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1040910	chr10:4554674-4606939	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4567400-4571000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:4568400-4570800	Enhancers	HSMMtube	muscle
3	chr10:4568400-4571200	Enhancers	Muscle Satellite Cultured Cells	--
4	chr10:4568400-4571600	Enhancers	HSMM	muscle
5	chr10:4568800-4570800	Enhancers	HMEC	breast
6	chr10:4569000-4570600	Enhancers	Osteobl	bone
7	chr10:4569600-4571000	Enhancers	NHEK	skin
8	chr10:4570000-4571400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr10:4570000-4571400	Enhancers	NHDF-Ad	bronchial
10	chr10:4570000-4573800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr10:4570000-4574000	Weak transcription	Fetal Brain Male	brain
12	chr10:4570000-4575800	Weak transcription	Fetal Brain Female	brain
13	chr10:4570200-4573800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr10:4570200-4574200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:4570200-4574400	Weak transcription	Adipose Nuclei	Adipose
16	chr10:4570200-4574400	Weak transcription	NHLF	lung
17	chr10:4570200-4574600	Weak transcription	NH-A	brain
18	chr10:4570200-4575800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr10:4570400-4573800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr10:4570400-4574000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr10:4570400-4574600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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