Variant report

Variant	rs7103869
Chromosome Location	chr11:17083856-17083857
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000221322	Chromatin interaction
ENSG00000272034	Chromatin interaction
ENSG00000110700	Chromatin interaction
ENSG00000201403	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11827240	0.84[YRI][hapmap]
rs59729712	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60479979	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7114716	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431225	1.00[AMR][1000 genomes]
rs73431262	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7933318	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs7942085	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7947814	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv971988	chr11:17068362-17084978	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17069400-17096200	Weak transcription	Pancreas	Pancrea
2	chr11:17070600-17088400	Weak transcription	Fetal Intestine Small	intestine
3	chr11:17079400-17094600	Weak transcription	Primary B cells from cord blood	blood
4	chr11:17083800-17093800	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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