Variant report

Variant	rs7109170
Chromosome Location	chr11:83720217-83720218
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83715504..83717050-chr11:83718239..83720670,2	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs12786173	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12786293	0.82[CEU][hapmap];0.89[EUR][1000 genomes]
rs12786844	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12787995	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12789072	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12789666	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12791771	1.00[CEU][hapmap]
rs12791934	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12792083	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12794134	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12795168	0.89[EUR][1000 genomes]
rs12797177	0.89[EUR][1000 genomes]
rs12797793	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12799748	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12800687	1.00[CEU][hapmap]
rs12802882	0.89[EUR][1000 genomes]
rs12805074	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12805464	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12805533	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12805593	0.89[EUR][1000 genomes]
rs12805936	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12806818	0.89[EUR][1000 genomes]
rs12807339	0.89[EUR][1000 genomes]
rs12809044	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs34131208	0.89[EUR][1000 genomes]
rs34150725	0.89[EUR][1000 genomes]
rs34211389	0.89[EUR][1000 genomes]
rs34281369	0.89[EUR][1000 genomes]
rs34316246	0.86[EUR][1000 genomes]
rs34413586	0.89[EUR][1000 genomes]
rs34658258	0.89[EUR][1000 genomes]
rs35292700	0.89[EUR][1000 genomes]
rs35388672	0.89[EUR][1000 genomes]
rs35532485	0.89[EUR][1000 genomes]
rs35629749	0.89[EUR][1000 genomes]
rs35704316	0.89[EUR][1000 genomes]
rs35728121	0.89[EUR][1000 genomes]
rs35804057	0.89[EUR][1000 genomes]
rs35918539	0.89[EUR][1000 genomes]
rs36034592	0.86[EUR][1000 genomes]
rs36165842	0.89[EUR][1000 genomes]
rs36189811	0.89[EUR][1000 genomes]
rs71469609	0.89[EUR][1000 genomes]
rs71469611	0.89[EUR][1000 genomes]
rs71469615	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898025	chr11:83658909-83796678	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv1039924	chr11:83662904-83993497	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv541102	chr11:83662904-83993497	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv898026	chr11:83685801-83789540	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv1814410	chr11:83696133-83775326	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv1809938	chr11:83716145-83789540	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
7	nsv898027	chr11:83717887-83798485	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
8	nsv898028	chr11:83717887-83817360	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
9	nsv898029	chr11:83717887-83939591	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83714800-83723200	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:83719000-83722800	Weak transcription	Brain Angular Gyrus	brain
3	chr11:83720200-83720800	Enhancers	Brain Substantia Nigra	brain

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