Variant report

Variant rs7109948
Chromosome Location chr11:15866420-15866421
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:15853000-15866600 Weak transcription Left Ventricle heart
2 chr11:15854200-15866600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr11:15860800-15868000 Enhancers Cortex derived primary cultured neurospheres brain
4 chr11:15862800-15866800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:15863000-15868400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr11:15863200-15867200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:15863600-15867800 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr11:15863800-15867800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:15864000-15866800 Enhancers Brain Cingulate Gyrus brain
10 chr11:15864000-15867000 Enhancers HUES64 Cell Line embryonic stem cell
11 chr11:15864000-15867800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr11:15864000-15867800 Enhancers Brain Substantia Nigra brain
13 chr11:15864200-15867600 Enhancers H1 Cell Line embryonic stem cell
14 chr11:15864200-15867800 Enhancers HUES48 Cell Line embryonic stem cell
15 chr11:15864400-15867000 Enhancers Fetal Brain Female brain
16 chr11:15864400-15867200 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr11:15864400-15867200 Enhancers Brain Hippocampus Middle brain
18 chr11:15864600-15867000 Enhancers HUES6 Cell Line embryonic stem cell
19 chr11:15864600-15867200 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr11:15864600-15867200 Enhancers Brain Anterior Caudate brain
21 chr11:15864600-15867200 Enhancers Brain Inferior Temporal Lobe brain
22 chr11:15864600-15867400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr11:15864600-15867600 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr11:15864800-15867000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr11:15864800-15867600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr11:15865400-15866600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr11:15865400-15866800 Weak transcription Fetal Muscle Trunk muscle
28 chr11:15865400-15867200 Enhancers Brain Angular Gyrus brain
29 chr11:15865400-15867600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr11:15865600-15866600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr11:15865600-15866600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr11:15865600-15867600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr11:15865600-15867800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr11:15865600-15872400 Weak transcription Psoas Muscle Psoas
35 chr11:15865600-15873000 Weak transcription Right Atrium heart
36 chr11:15865800-15867800 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr11:15866200-15866600 Weak transcription Fetal Brain Male brain
38 chr11:15866200-15867600 Enhancers Brain Germinal Matrix brain
39 chr11:15866400-15866800 Weak transcription Fetal Lung lung
40 chr11:15866400-15867200 Enhancers Fetal Muscle Leg muscle

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