Variant report

Variant	rs7113716
Chromosome Location	chr11:74717489-74717490
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:74695159..74697355-chr11:74716327..74718010,2	K562	blood:
2	chr11:74705906..74708555-chr11:74716655..74718649,2	K562	blood:
3	chr11:74703562..74705361-chr11:74717138..74719834,2	K562	blood:
4	chr11:74709502..74714442-chr11:74716351..74722182,6	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11236328	1.00[MEX][hapmap]
rs17133490	1.00[MEX][hapmap]
rs56082411	1.00[AMR][1000 genomes]
rs61353358	1.00[AMR][1000 genomes]
rs7109824	1.00[MEX][hapmap]
rs7110097	0.84[YRI][hapmap];1.00[AMR][1000 genomes]
rs7118787	1.00[MEX][hapmap]
rs7131002	1.00[AMR][1000 genomes]
rs7951337	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832210	chr11:74562782-74732133	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74700400-74723000	Weak transcription	Small Intestine	intestine
2	chr11:74700600-74722600	Weak transcription	HSMM	muscle
3	chr11:74700600-74725000	Weak transcription	HSMMtube	muscle
4	chr11:74701000-74722000	Weak transcription	Fetal Kidney	kidney
5	chr11:74701000-74722600	Weak transcription	HUVEC	blood vessel
6	chr11:74701000-74723800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr11:74701600-74721600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr11:74702400-74722800	Weak transcription	Stomach Mucosa	stomach
9	chr11:74702800-74717600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr11:74703200-74720600	Weak transcription	Psoas Muscle	Psoas
11	chr11:74712000-74728200	Strong transcription	Monocytes-CD14+_RO01746	blood
12	chr11:74714200-74719200	Strong transcription	Primary hematopoietic stem cells	blood
13	chr11:74714200-74725400	Strong transcription	Dnd41	blood
14	chr11:74714600-74719400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:74714800-74725000	Strong transcription	Primary monocytes fromperipheralblood	blood
16	chr11:74715000-74723600	Strong transcription	HUES48 Cell Line	embryonic stem cell
17	chr11:74715000-74724000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr11:74715400-74719200	Strong transcription	Hela-S3	cervix
19	chr11:74715400-74721000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr11:74715400-74721600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr11:74715400-74723600	Strong transcription	Primary T helper cells PMA-I stimulated	--
22	chr11:74715400-74723800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr11:74715600-74723600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr11:74715600-74725400	Strong transcription	Liver	Liver
25	chr11:74716000-74721000	Strong transcription	Osteobl	bone
26	chr11:74716200-74718600	Strong transcription	NHEK	skin
27	chr11:74716200-74718800	Strong transcription	Placenta	Placenta
28	chr11:74716200-74719000	Strong transcription	Primary B cells from cord blood	blood
29	chr11:74716200-74719000	Strong transcription	Rectal Mucosa Donor 31	rectum
30	chr11:74716200-74719400	Strong transcription	HepG2	liver
31	chr11:74716200-74719800	Strong transcription	Skeletal Muscle Female	skeletal muscle
32	chr11:74716200-74721600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
33	chr11:74716200-74721600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr11:74716200-74721800	Strong transcription	HUES64 Cell Line	embryonic stem cell
35	chr11:74716200-74721800	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr11:74716200-74722000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr11:74716200-74722200	Strong transcription	K562	blood
38	chr11:74716200-74724000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr11:74716200-74724000	Strong transcription	GM12878-XiMat	blood
40	chr11:74716200-74725600	Strong transcription	Primary T cells from cord blood	blood
41	chr11:74716400-74717600	Strong transcription	Cortex derived primary cultured neurospheres	brain
42	chr11:74716400-74717600	Strong transcription	Colonic Mucosa	Colon
43	chr11:74716400-74717600	Strong transcription	Esophagus	oesophagus
44	chr11:74716400-74717800	Strong transcription	Fetal Intestine Small	intestine
45	chr11:74716400-74717800	Strong transcription	A549	lung
46	chr11:74716400-74718000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr11:74716400-74718000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr11:74716400-74718000	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr11:74716400-74718000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
50	chr11:74716400-74718000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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