Variant report

Variant	rs7116407
Chromosome Location	chr11:32636914-32636915
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10458903	0.93[JPT][hapmap]
rs11031921	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11031930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11031984	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs12223202	0.89[CHB][hapmap]
rs12224741	0.83[YRI][hapmap]
rs201880	0.83[YRI][hapmap]
rs4756149	0.83[YRI][hapmap]
rs4756179	0.83[YRI][hapmap]
rs7104606	0.89[YRI][hapmap]
rs72895301	0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72897126	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72910946	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72910965	0.84[EUR][1000 genomes]
rs72910967	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3424973	chr11:32633425-32664062	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32625400-32637200	Weak transcription	Fetal Heart	heart
2	chr11:32636600-32637000	Weak transcription	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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