Variant report

Variant	rs7118162
Chromosome Location	chr11:15847506-15847507
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15847163..15849862-chr11:15922675..15924255,2	MCF-7	breast:
2	chr11:15846564..15849425-chr11:16633366..16635288,2	K562	blood:

Variant related genes	Relation type
ENSG00000110696	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11023752	1.00[AMR][1000 genomes]
rs11023755	0.89[AMR][1000 genomes]
rs67677040	0.91[AFR][1000 genomes]
rs7122685	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15829800-15848000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15838800-15848000	Weak transcription	Left Ventricle	heart
3	chr11:15839400-15850200	Weak transcription	Aorta	Aorta
4	chr11:15841600-15848600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr11:15841800-15848600	Weak transcription	Right Atrium	heart
6	chr11:15841800-15849200	Weak transcription	Adipose Nuclei	Adipose
7	chr11:15841800-15849600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr11:15845000-15848400	Enhancers	NH-A	brain
9	chr11:15846200-15847600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr11:15846200-15847600	Weak transcription	Osteobl	bone
11	chr11:15846600-15849000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr11:15847000-15848200	Enhancers	Pancreas	Pancrea
13	chr11:15847000-15848400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr11:15847000-15848400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr11:15847000-15848800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr11:15847200-15850600	Enhancers	Brain Germinal Matrix	brain
17	chr11:15847400-15848200	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr11:15847400-15848200	Enhancers	Fetal Muscle Leg	muscle
19	chr11:15847400-15848800	Enhancers	Fetal Muscle Trunk	muscle
20	chr11:15847400-15852200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr11:15847400-15853800	Enhancers	Cortex derived primary cultured neurospheres	brain

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